Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
VPS8Q8N3P4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
VPS8Q8N3P4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC30.03■■■□□ 2.4
VPS8Q8N3P4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
VPS8Q8N3P4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
VPS8Q8N3P4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
VPS8Q8N3P4 AC008622.2-201ENST00000617006 1229 ntBASIC30.03■■■□□ 2.4
VPS8Q8N3P4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
VPS8Q8N3P4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 IRX1P1-201ENST00000438849 1838 ntBASIC30.02■■■□□ 2.4
VPS8Q8N3P4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 AC006011.2-201ENST00000621313 1158 ntBASIC30.02■■■□□ 2.4
VPS8Q8N3P4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VPS8Q8N3P4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.4
VPS8Q8N3P4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
VPS8Q8N3P4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC30.01■■■□□ 2.4
VPS8Q8N3P4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
VPS8Q8N3P4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
VPS8Q8N3P4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
VPS8Q8N3P4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.01■■■□□ 2.39
VPS8Q8N3P4 TMPOP1-202ENST00000424642 1267 ntBASIC30.01■■■□□ 2.39
VPS8Q8N3P4 AL138966.2-201ENST00000621997 464 ntBASIC30.01■■■□□ 2.39
VPS8Q8N3P4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
VPS8Q8N3P4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC30.01■■■□□ 2.39
VPS8Q8N3P4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30■■■□□ 2.39
VPS8Q8N3P4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30■■■□□ 2.39
VPS8Q8N3P4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
VPS8Q8N3P4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC30■■■□□ 2.39
VPS8Q8N3P4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC30■■■□□ 2.39
VPS8Q8N3P4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30■■■□□ 2.39
VPS8Q8N3P4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC30■■■□□ 2.39
VPS8Q8N3P4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC30■■■□□ 2.39
VPS8Q8N3P4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30■■■□□ 2.39
VPS8Q8N3P4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC30■■■□□ 2.39
VPS8Q8N3P4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
VPS8Q8N3P4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC30■■■□□ 2.39
VPS8Q8N3P4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
VPS8Q8N3P4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
VPS8Q8N3P4 AL032819.2-201ENST00000624543 2162 ntBASIC30■■■□□ 2.39
VPS8Q8N3P4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC30■■■□□ 2.39
VPS8Q8N3P4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC30■■■□□ 2.39
VPS8Q8N3P4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC30■■■□□ 2.39
VPS8Q8N3P4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC29.99■■■□□ 2.39
VPS8Q8N3P4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
VPS8Q8N3P4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
VPS8Q8N3P4 KRT8P3-201ENST00000519669 1449 ntBASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms