Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 KRT18P5-201ENST00000436075 1291 ntBASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM1Q86UE6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.64■□□□□ 0.26
LRRTM1Q86UE6 NOC2LP2-201ENST00000407594 1944 ntBASIC16.64■□□□□ 0.26
LRRTM1Q86UE6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
LRRTM1Q86UE6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 LSM12P1-201ENST00000411836 588 ntBASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 AC073210.2-201ENST00000430369 194 ntBASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRTM1Q86UE6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 FEM1AP3-201ENST00000403722 1741 ntBASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 AC087623.3-201ENST00000607047 1098 ntBASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LRRTM1Q86UE6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms