Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI1Q7Z5J4 AL158211.5-201ENST00000623583 2518 ntBASIC16.39■□□□□ 0.22
RAI1Q7Z5J4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 STARP1-201ENST00000397973 869 ntBASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.39■□□□□ 0.21
RAI1Q7Z5J4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 KRT18P48-201ENST00000434763 852 ntBASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 KRT18P56-201ENST00000507275 550 ntBASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.38■□□□□ 0.21
RAI1Q7Z5J4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 KRT8P45-201ENST00000414328 1447 ntBASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 HCG4P8-203ENST00000443049 980 ntBASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 Z82202.1-201ENST00000623446 1880 ntBASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 HOMER2P1-201ENST00000455653 964 ntBASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms