Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 AC239809.2-201ENST00000415381 517 ntBASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 RPPH1-201ENST00000516869 333 ntBASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 AC004264.1-201ENST00000608354 794 ntBASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.23■□□□□ 0.35
NHLRC1Q6VVB1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 PRORSD1P-201ENST00000295112 541 ntBASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NHLRC1Q6VVB1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 TEX21P-204ENST00000641479 1693 ntBASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 FAM201B-201ENST00000458407 597 ntBASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.21■□□□□ 0.35
NHLRC1Q6VVB1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NHLRC1Q6VVB1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
NHLRC1Q6VVB1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NHLRC1Q6VVB1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NHLRC1Q6VVB1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NHLRC1Q6VVB1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms