Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP4Q6PIL6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 AC009053.2-201ENST00000563701 2365 ntBASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP4Q6PIL6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
KCNIP4Q6PIL6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 KRT8P36-201ENST00000489121 1440 ntBASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
KCNIP4Q6PIL6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP4Q6PIL6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms