Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 AC008687.6-201ENST00000596318 630 ntBASIC19.56■□□□□ 0.72
CASC4Q6P4E1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 SDHAP1-207ENST00000440850 2000 ntBASIC19.56■□□□□ 0.72
CASC4Q6P4E1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASC4Q6P4E1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 AC104771.1-201ENST00000603335 964 ntBASIC19.55■□□□□ 0.72
CASC4Q6P4E1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASC4Q6P4E1 AC104417.2-201ENST00000562989 1793 ntBASIC19.55■□□□□ 0.72
CASC4Q6P4E1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 AC090192.1-201ENST00000517740 490 ntBASIC19.54■□□□□ 0.72
CASC4Q6P4E1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 AL121829.2-201ENST00000620908 328 ntBASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASC4Q6P4E1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CASC4Q6P4E1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms