Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC116562.4-201ENST00000641316 2276 ntBASIC21.82■■□□□ 1.08
PPP4R3AQ6IN85 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R3AQ6IN85 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R3AQ6IN85 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R3AQ6IN85 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.82■■□□□ 1.08
PPP4R3AQ6IN85 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R3AQ6IN85 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 AL596275.1-201ENST00000423464 877 ntBASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 AC091390.4-202ENST00000476426 537 ntBASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 REXO1L10P-201ENST00000615707 1290 ntBASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 REXO1L12P-201ENST00000622156 912 ntBASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PPP4R3AQ6IN85 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 AC008040.2-201ENST00000461049 708 ntBASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 AP003071.4-201ENST00000562276 1284 ntBASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 KRT17P2-201ENST00000300992 1314 ntBASIC21.8■■□□□ 1.08
PPP4R3AQ6IN85 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3AQ6IN85 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 TSPY21P-201ENST00000433481 731 ntBASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 AC011298.2-201ENST00000617989 482 ntBASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3AQ6IN85 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms