Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 AL137784.2-201ENST00000607332 1000 ntBASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 AC120498.8-201ENST00000614275 531 ntBASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIF1Q5T3J3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 PNMA6B-201ENST00000538162 1200 ntBASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 AC060766.5-201ENST00000590539 871 ntBASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIF1Q5T3J3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LRIF1Q5T3J3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRIF1Q5T3J3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRIF1Q5T3J3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.08■□□□□ 0.49
LRIF1Q5T3J3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRIF1Q5T3J3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRIF1Q5T3J3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRIF1Q5T3J3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 AC083906.6-201ENST00000641366 219 ntBASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
LRIF1Q5T3J3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 AL390961.4-201ENST00000623958 2535 ntBASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 TSPY6P-201ENST00000448518 926 ntBASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 AC006970.2-201ENST00000450065 779 ntBASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 AC097658.1-201ENST00000475555 843 ntBASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 MIR4758-201ENST00000577688 71 ntBASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms