Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VARS2Q5ST30 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VARS2Q5ST30 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.33■□□□□ 0.84
VARS2Q5ST30 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VARS2Q5ST30 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VARS2Q5ST30 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 KRT8P45-201ENST00000414328 1447 ntBASIC20.32■□□□□ 0.84
VARS2Q5ST30 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.32■□□□□ 0.84
VARS2Q5ST30 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VARS2Q5ST30 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 TSPY5P-201ENST00000426936 936 ntBASIC20.31■□□□□ 0.84
VARS2Q5ST30 TSPY21P-201ENST00000433481 731 ntBASIC20.31■□□□□ 0.84
VARS2Q5ST30 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 LINC01238-205ENST00000567549 1107 ntBASIC20.31■□□□□ 0.84
VARS2Q5ST30 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 AC011558.1-201ENST00000623459 338 ntBASIC20.31■□□□□ 0.84
VARS2Q5ST30 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VARS2Q5ST30 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
VARS2Q5ST30 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
VARS2Q5ST30 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
VARS2Q5ST30 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.3■□□□□ 0.84
VARS2Q5ST30 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
VARS2Q5ST30 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 FAM8A6P-201ENST00000407496 1135 ntBASIC20.3■□□□□ 0.84
VARS2Q5ST30 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.3■□□□□ 0.84
VARS2Q5ST30 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VARS2Q5ST30 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.3■□□□□ 0.84
VARS2Q5ST30 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VARS2Q5ST30 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.29■□□□□ 0.84
VARS2Q5ST30 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VARS2Q5ST30 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms