Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC012618.2-201ENST00000428058 849 ntBASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 TSPY23P-201ENST00000440136 739 ntBASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 AC233702.5-201ENST00000584107 538 ntBASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 Z99916.2-201ENST00000604037 246 ntBASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 AC113410.3-201ENST00000623366 203 ntBASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 BX323043.1-201ENST00000641006 1765 ntBASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 RCC2P6-201ENST00000526625 1557 ntBASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PTPN20Q4JDL3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 AC026271.3-201ENST00000571884 352 ntBASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 CD177P1-201ENST00000606252 935 ntBASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN20Q4JDL3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 FP475955.4-201ENST00000623131 1990 ntBASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 TSPY21P-201ENST00000433481 731 ntBASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 AC008040.2-201ENST00000461049 708 ntBASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 AC091390.4-202ENST00000476426 537 ntBASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 AC008550.1-201ENST00000511500 884 ntBASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 AL031985.4-201ENST00000642138 673 ntBASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN20Q4JDL3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms