Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA1EQ15878 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA1EQ15878 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 AL162377.1-201ENST00000618844 1793 ntBASIC18.68■□□□□ 0.58
CACNA1EQ15878 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CACNA1EQ15878 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA1EQ15878 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 AC012615.1-201ENST00000565797 1299 ntBASIC18.67■□□□□ 0.58
CACNA1EQ15878 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 ZNF815P-204ENST00000434898 1737 ntBASIC18.67■□□□□ 0.58
CACNA1EQ15878 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 GPAT2P1-201ENST00000444924 1672 ntBASIC18.67■□□□□ 0.58
CACNA1EQ15878 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNA1EQ15878 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.67■□□□□ 0.58
CACNA1EQ15878 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 AC093525.10-201ENST00000625130 1569 ntBASIC18.66■□□□□ 0.58
CACNA1EQ15878 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 AL671883.3-201ENST00000603274 991 ntBASIC18.66■□□□□ 0.58
CACNA1EQ15878 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 AC020907.5-201ENST00000624372 1936 ntBASIC18.66■□□□□ 0.58
CACNA1EQ15878 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 AC016734.2-201ENST00000624325 1377 ntBASIC18.66■□□□□ 0.58
CACNA1EQ15878 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 AL732292.2-201ENST00000609649 430 ntBASIC18.66■□□□□ 0.58
CACNA1EQ15878 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNA1EQ15878 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNA1EQ15878 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms