Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCL20P78556 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 AC105265.2-201ENST00000467189 838 ntBASIC15.12■□□□□ 0.01
CCL20P78556 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL20P78556 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL20P78556 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CCL20P78556 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL20P78556 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
CCL20P78556 TSPY26P-201ENST00000476365 1326 ntBASIC15.12■□□□□ 0.01
CCL20P78556 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CCL20P78556 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL20P78556 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL20P78556 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CCL20P78556 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CCL20P78556 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 KRT8P20-201ENST00000423953 1409 ntBASIC15.11■□□□□ 0.01
CCL20P78556 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL20P78556 PGM5P4-201ENST00000421970 445 ntBASIC15.11■□□□□ 0.01
CCL20P78556 AC010141.2-201ENST00000452426 721 ntBASIC15.11■□□□□ 0.01
CCL20P78556 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL20P78556 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCL20P78556 AL358852.1-201ENST00000623174 1268 ntBASIC15.11■□□□□ 0.01
CCL20P78556 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCL20P78556 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCL20P78556 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL20P78556 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL20P78556 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCL20P78556 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL20P78556 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.1■□□□□ 0.01
CCL20P78556 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL20P78556 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 SIRPAP1-201ENST00000448467 1770 ntBASIC15.1■□□□□ 0.01
CCL20P78556 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL20P78556 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCL20P78556 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CCL20P78556 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.1■□□□□ 0.01
CCL20P78556 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCL20P78556 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL20P78556 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCL20P78556 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.1■□□□□ 0.01
CCL20P78556 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCL20P78556 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms