Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CX3CL1P78423 AC005332.7-201ENST00000614046 2005 ntBASIC15.46■□□□□ 0.07
CX3CL1P78423 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CX3CL1P78423 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CX3CL1P78423 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CX3CL1P78423 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CX3CL1P78423 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CX3CL1P78423 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.45■□□□□ 0.06
CX3CL1P78423 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CX3CL1P78423 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CX3CL1P78423 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.45■□□□□ 0.06
CX3CL1P78423 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.45■□□□□ 0.06
CX3CL1P78423 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.45■□□□□ 0.06
CX3CL1P78423 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.45■□□□□ 0.06
CX3CL1P78423 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.45■□□□□ 0.06
CX3CL1P78423 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CX3CL1P78423 AC124016.1-201ENST00000609552 612 ntBASIC15.45■□□□□ 0.06
CX3CL1P78423 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.45■□□□□ 0.06
CX3CL1P78423 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.45■□□□□ 0.06
CX3CL1P78423 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.45■□□□□ 0.06
CX3CL1P78423 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CX3CL1P78423 NEFHP1-201ENST00000412845 2629 ntBASIC15.45■□□□□ 0.06
CX3CL1P78423 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.45■□□□□ 0.06
CX3CL1P78423 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.45■□□□□ 0.06
CX3CL1P78423 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.44■□□□□ 0.06
CX3CL1P78423 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CX3CL1P78423 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 AC133681.1-201ENST00000465482 601 ntBASIC15.44■□□□□ 0.06
CX3CL1P78423 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 C1QBPP2-201ENST00000528754 825 ntBASIC15.44■□□□□ 0.06
CX3CL1P78423 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 AC110285.5-201ENST00000611501 352 ntBASIC15.44■□□□□ 0.06
CX3CL1P78423 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CX3CL1P78423 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.44■□□□□ 0.06
CX3CL1P78423 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CX3CL1P78423 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CX3CL1P78423 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.43■□□□□ 0.06
CX3CL1P78423 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CX3CL1P78423 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.43■□□□□ 0.06
CX3CL1P78423 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.43■□□□□ 0.06
CX3CL1P78423 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CX3CL1P78423 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CX3CL1P78423 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CX3CL1P78423 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.43■□□□□ 0.06
CX3CL1P78423 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.43■□□□□ 0.06
CX3CL1P78423 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.43■□□□□ 0.06
CX3CL1P78423 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CX3CL1P78423 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms