Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.19■□□□□ 0.82
USP46P62068 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
USP46P62068 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.19■□□□□ 0.82
USP46P62068 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.18■□□□□ 0.82
USP46P62068 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
USP46P62068 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
USP46P62068 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
USP46P62068 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 TERF1P1-201ENST00000311003 1181 ntBASIC20.18■□□□□ 0.82
USP46P62068 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.18■□□□□ 0.82
USP46P62068 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.18■□□□□ 0.82
USP46P62068 KRT18P57-201ENST00000443599 1254 ntBASIC20.18■□□□□ 0.82
USP46P62068 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.18■□□□□ 0.82
USP46P62068 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP46P62068 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.18■□□□□ 0.82
USP46P62068 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP46P62068 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP46P62068 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP46P62068 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP46P62068 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.17■□□□□ 0.82
USP46P62068 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.17■□□□□ 0.82
USP46P62068 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 MIR1224-201ENST00000408193 85 ntBASIC20.17■□□□□ 0.82
USP46P62068 TMPOP1-202ENST00000424642 1267 ntBASIC20.17■□□□□ 0.82
USP46P62068 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.17■□□□□ 0.82
USP46P62068 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
USP46P62068 AC010203.1-204ENST00000548782 407 ntBASIC20.17■□□□□ 0.82
USP46P62068 FAM87A-204ENST00000613235 858 ntBASIC20.17■□□□□ 0.82
USP46P62068 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.17■□□□□ 0.82
USP46P62068 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.17■□□□□ 0.82
USP46P62068 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 KRT8P11-201ENST00000409686 1436 ntBASIC20.17■□□□□ 0.82
USP46P62068 AC073508.3-201ENST00000619697 1419 ntBASIC20.17■□□□□ 0.82
USP46P62068 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.17■□□□□ 0.82
USP46P62068 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.17■□□□□ 0.82
USP46P62068 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP46P62068 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.16■□□□□ 0.82
USP46P62068 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
USP46P62068 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.16■□□□□ 0.82
USP46P62068 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP46P62068 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.16■□□□□ 0.82
USP46P62068 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.16■□□□□ 0.82
USP46P62068 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 CKBP1-201ENST00000565489 1086 ntBASIC20.16■□□□□ 0.82
USP46P62068 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
USP46P62068 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.16■□□□□ 0.82
USP46P62068 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
USP46P62068 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.16■□□□□ 0.82
USP46P62068 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP46P62068 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
USP46P62068 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
USP46P62068 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.15■□□□□ 0.82
USP46P62068 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.15■□□□□ 0.82
USP46P62068 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
USP46P62068 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP46P62068 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.15■□□□□ 0.82
USP46P62068 AC010331.1-201ENST00000611423 582 ntBASIC20.15■□□□□ 0.82
USP46P62068 AC092865.7-201ENST00000641832 219 ntBASIC20.15■□□□□ 0.82
USP46P62068 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms