Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RPS3AP61247 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.95■□□□□ 0.46
RPS3AP61247 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.95■□□□□ 0.46
RPS3AP61247 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.95■□□□□ 0.46
RPS3AP61247 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.95■□□□□ 0.46
RPS3AP61247 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.95■□□□□ 0.46
RPS3AP61247 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.95■□□□□ 0.46
RPS3AP61247 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RPS3AP61247 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.95■□□□□ 0.46
RPS3AP61247 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RPS3AP61247 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RPS3AP61247 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.95■□□□□ 0.46
RPS3AP61247 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RPS3AP61247 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS3AP61247 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS3AP61247 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS3AP61247 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS3AP61247 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RPS3AP61247 AC069544.1-201ENST00000609399 999 ntBASIC17.94■□□□□ 0.46
RPS3AP61247 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RPS3AP61247 Z82202.1-201ENST00000623446 1880 ntBASIC17.94■□□□□ 0.46
RPS3AP61247 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS3AP61247 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RPS3AP61247 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS3AP61247 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPS3AP61247 PTBP1P-201ENST00000554374 1601 ntBASIC17.94■□□□□ 0.46
RPS3AP61247 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RPS3AP61247 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS3AP61247 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPS3AP61247 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPS3AP61247 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.93■□□□□ 0.46
RPS3AP61247 KRT16P6-202ENST00000425692 1426 ntBASIC17.93■□□□□ 0.46
RPS3AP61247 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.93■□□□□ 0.46
RPS3AP61247 PRKY-204ENST00000533551 1019 ntBASIC17.93■□□□□ 0.46
RPS3AP61247 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS3AP61247 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS3AP61247 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RPS3AP61247 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS3AP61247 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS3AP61247 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RPS3AP61247 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
RPS3AP61247 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS3AP61247 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.92■□□□□ 0.46
RPS3AP61247 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS3AP61247 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS3AP61247 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.92■□□□□ 0.46
RPS3AP61247 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS3AP61247 PRORSD1P-201ENST00000295112 541 ntBASIC17.92■□□□□ 0.46
RPS3AP61247 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS3AP61247 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.92■□□□□ 0.46
RPS3AP61247 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS3AP61247 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS3AP61247 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.92■□□□□ 0.46
RPS3AP61247 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RPS3AP61247 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS3AP61247 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RPS3AP61247 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS3AP61247 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS3AP61247 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms