Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN6P56747 KRT8P11-201ENST00000409686 1436 ntBASIC18.42■□□□□ 0.54
CLDN6P56747 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN6P56747 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 ATP5G2P1-201ENST00000433580 426 ntBASIC18.42■□□□□ 0.54
CLDN6P56747 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN6P56747 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN6P56747 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN6P56747 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CLDN6P56747 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN6P56747 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLDN6P56747 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN6P56747 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLDN6P56747 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLDN6P56747 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLDN6P56747 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN6P56747 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN6P56747 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN6P56747 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN6P56747 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN6P56747 AC092597.1-201ENST00000487352 616 ntBASIC18.41■□□□□ 0.54
CLDN6P56747 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLDN6P56747 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN6P56747 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CLDN6P56747 NPAP1P7-201ENST00000613027 823 ntBASIC18.41■□□□□ 0.54
CLDN6P56747 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN6P56747 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN6P56747 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN6P56747 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN6P56747 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLDN6P56747 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN6P56747 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN6P56747 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN6P56747 STARP1-201ENST00000397973 869 ntBASIC18.4■□□□□ 0.54
CLDN6P56747 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 AL845331.1-201ENST00000424978 1190 ntBASIC18.4■□□□□ 0.54
CLDN6P56747 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN6P56747 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN6P56747 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN6P56747 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN6P56747 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN6P56747 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN6P56747 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.4■□□□□ 0.54
CLDN6P56747 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.4■□□□□ 0.54
CLDN6P56747 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CLDN6P56747 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN6P56747 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN6P56747 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN6P56747 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CLDN6P56747 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.39■□□□□ 0.54
CLDN6P56747 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN6P56747 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN6P56747 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN6P56747 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLDN6P56747 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN6P56747 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms