Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC4P55056 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APOC4P55056 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.07□□□□□ -0.16
APOC4P55056 SLC25A3P1-201ENST00000443844 931 ntBASIC14.07□□□□□ -0.16
APOC4P55056 TSPY17P-201ENST00000450329 467 ntBASIC14.07□□□□□ -0.16
APOC4P55056 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC4P55056 CA15P1-201ENST00000481698 905 ntBASIC14.07□□□□□ -0.16
APOC4P55056 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC4P55056 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 AL512604.3-201ENST00000569583 964 ntBASIC14.07□□□□□ -0.16
APOC4P55056 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC4P55056 AC092865.7-201ENST00000641832 219 ntBASIC14.07□□□□□ -0.16
APOC4P55056 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 LINC01465-201ENST00000408887 1940 ntBASIC14.07□□□□□ -0.16
APOC4P55056 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
APOC4P55056 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.06□□□□□ -0.16
APOC4P55056 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC4P55056 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
APOC4P55056 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 TMPOP1-202ENST00000424642 1267 ntBASIC14.06□□□□□ -0.16
APOC4P55056 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOC4P55056 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.06□□□□□ -0.16
APOC4P55056 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC4P55056 CKBP1-201ENST00000565489 1086 ntBASIC14.06□□□□□ -0.16
APOC4P55056 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC4P55056 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC4P55056 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC4P55056 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOC4P55056 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC4P55056 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC4P55056 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 HMGA1P5-201ENST00000412453 271 ntBASIC14.05□□□□□ -0.16
APOC4P55056 TSPY21P-201ENST00000433481 731 ntBASIC14.05□□□□□ -0.16
APOC4P55056 AC008040.2-201ENST00000461049 708 ntBASIC14.05□□□□□ -0.16
APOC4P55056 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.05□□□□□ -0.16
APOC4P55056 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC4P55056 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 AC010653.2-201ENST00000623505 997 ntBASIC14.05□□□□□ -0.16
APOC4P55056 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC4P55056 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC4P55056 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.05□□□□□ -0.16
APOC4P55056 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms