Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATN1P54259 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATN1P54259 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.16■□□□□ 0.98
ATN1P54259 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.16■□□□□ 0.98
ATN1P54259 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ATN1P54259 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.16■□□□□ 0.98
ATN1P54259 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 KRT18P1-202ENST00000452408 1331 ntBASIC21.16■□□□□ 0.98
ATN1P54259 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATN1P54259 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATN1P54259 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.16■□□□□ 0.98
ATN1P54259 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATN1P54259 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ATN1P54259 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATN1P54259 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.16■□□□□ 0.98
ATN1P54259 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATN1P54259 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
ATN1P54259 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ATN1P54259 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.15■□□□□ 0.98
ATN1P54259 KRT8P26-201ENST00000534154 1276 ntBASIC21.15■□□□□ 0.98
ATN1P54259 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.15■□□□□ 0.98
ATN1P54259 AL160237.2-201ENST00000556165 472 ntBASIC21.15■□□□□ 0.98
ATN1P54259 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATN1P54259 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATN1P54259 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATN1P54259 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ATN1P54259 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATN1P54259 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
ATN1P54259 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATN1P54259 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.14■□□□□ 0.98
ATN1P54259 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATN1P54259 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ATN1P54259 TSPY19P-201ENST00000418461 509 ntBASIC21.14■□□□□ 0.97
ATN1P54259 TSPY18P-201ENST00000441642 509 ntBASIC21.14■□□□□ 0.97
ATN1P54259 AP000867.3-201ENST00000524675 377 ntBASIC21.14■□□□□ 0.97
ATN1P54259 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.14■□□□□ 0.97
ATN1P54259 AC091304.2-201ENST00000564639 760 ntBASIC21.14■□□□□ 0.97
ATN1P54259 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.14■□□□□ 0.97
ATN1P54259 RN7SL602P-201ENST00000578326 324 ntBASIC21.14■□□□□ 0.97
ATN1P54259 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.14■□□□□ 0.97
ATN1P54259 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATN1P54259 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATN1P54259 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.14■□□□□ 0.97
ATN1P54259 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATN1P54259 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATN1P54259 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ATN1P54259 AL162741.1-201ENST00000565563 1558 ntBASIC21.14■□□□□ 0.97
ATN1P54259 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.14■□□□□ 0.97
ATN1P54259 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.13■□□□□ 0.97
ATN1P54259 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
ATN1P54259 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATN1P54259 CHCHD2P8-201ENST00000429873 447 ntBASIC21.13■□□□□ 0.97
ATN1P54259 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.13■□□□□ 0.97
ATN1P54259 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.13■□□□□ 0.97
ATN1P54259 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.13■□□□□ 0.97
ATN1P54259 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.13■□□□□ 0.97
ATN1P54259 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATN1P54259 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATN1P54259 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
ATN1P54259 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATN1P54259 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATN1P54259 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATN1P54259 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATN1P54259 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATN1P54259 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.12■□□□□ 0.97
ATN1P54259 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ATN1P54259 AC092473.1-201ENST00000441098 221 ntBASIC21.12■□□□□ 0.97
ATN1P54259 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.12■□□□□ 0.97
ATN1P54259 FOSL1P1-201ENST00000511041 816 ntBASIC21.12■□□□□ 0.97
ATN1P54259 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATN1P54259 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.12■□□□□ 0.97
ATN1P54259 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ATN1P54259 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATN1P54259 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.11■□□□□ 0.97
ATN1P54259 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATN1P54259 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.11■□□□□ 0.97
ATN1P54259 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms