Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDX1P52945 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDX1P52945 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PDX1P52945 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.64■□□□□ 0.57
PDX1P52945 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDX1P52945 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
PDX1P52945 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
PDX1P52945 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PDX1P52945 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.63■□□□□ 0.57
PDX1P52945 CCR12P-201ENST00000446203 998 ntBASIC18.63■□□□□ 0.57
PDX1P52945 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.63■□□□□ 0.57
PDX1P52945 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.63■□□□□ 0.57
PDX1P52945 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDX1P52945 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.62■□□□□ 0.57
PDX1P52945 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PDX1P52945 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
PDX1P52945 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.62■□□□□ 0.57
PDX1P52945 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.62■□□□□ 0.57
PDX1P52945 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.62■□□□□ 0.57
PDX1P52945 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PDX1P52945 YBX1P2-201ENST00000489612 999 ntBASIC18.62■□□□□ 0.57
PDX1P52945 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDX1P52945 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.62■□□□□ 0.57
PDX1P52945 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
PDX1P52945 AL023803.3-201ENST00000615559 522 ntBASIC18.62■□□□□ 0.57
PDX1P52945 AC010653.2-201ENST00000623505 997 ntBASIC18.62■□□□□ 0.57
PDX1P52945 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDX1P52945 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 AL691432.2-201ENST00000607222 2038 ntBASIC18.62■□□□□ 0.57
PDX1P52945 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PDX1P52945 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDX1P52945 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDX1P52945 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PDX1P52945 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.61■□□□□ 0.57
PDX1P52945 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PDX1P52945 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.61■□□□□ 0.57
PDX1P52945 KRT8P8-201ENST00000434750 1448 ntBASIC18.61■□□□□ 0.57
PDX1P52945 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PDX1P52945 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.61■□□□□ 0.57
PDX1P52945 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.61■□□□□ 0.57
PDX1P52945 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 RNF152P1-201ENST00000397754 604 ntBASIC18.61■□□□□ 0.57
PDX1P52945 AL031133.1-201ENST00000406807 723 ntBASIC18.61■□□□□ 0.57
PDX1P52945 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.61■□□□□ 0.57
PDX1P52945 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PDX1P52945 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.61■□□□□ 0.57
PDX1P52945 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.61■□□□□ 0.57
PDX1P52945 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.61■□□□□ 0.57
PDX1P52945 LINC01238-205ENST00000567549 1107 ntBASIC18.61■□□□□ 0.57
PDX1P52945 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDX1P52945 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.61■□□□□ 0.57
PDX1P52945 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDX1P52945 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.6■□□□□ 0.57
PDX1P52945 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.6■□□□□ 0.57
PDX1P52945 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDX1P52945 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.6■□□□□ 0.57
PDX1P52945 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.6■□□□□ 0.57
PDX1P52945 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.6■□□□□ 0.57
PDX1P52945 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.6■□□□□ 0.57
PDX1P52945 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.6■□□□□ 0.57
PDX1P52945 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.6■□□□□ 0.57
PDX1P52945 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
PDX1P52945 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.6■□□□□ 0.57
PDX1P52945 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDX1P52945 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.59■□□□□ 0.57
PDX1P52945 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDX1P52945 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms