Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.71■■□□□ 1.07
USP11P51784 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.71■■□□□ 1.07
USP11P51784 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.71■■□□□ 1.07
USP11P51784 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 AL390955.1-201ENST00000428694 934 ntBASIC21.71■■□□□ 1.07
USP11P51784 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.71■■□□□ 1.07
USP11P51784 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.71■■□□□ 1.07
USP11P51784 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.71■■□□□ 1.07
USP11P51784 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.71■■□□□ 1.07
USP11P51784 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.71■■□□□ 1.07
USP11P51784 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.71■■□□□ 1.07
USP11P51784 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
USP11P51784 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.7■■□□□ 1.06
USP11P51784 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.7■■□□□ 1.06
USP11P51784 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
USP11P51784 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.7■■□□□ 1.06
USP11P51784 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.7■■□□□ 1.06
USP11P51784 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.7■■□□□ 1.06
USP11P51784 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
USP11P51784 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.7■■□□□ 1.06
USP11P51784 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.7■■□□□ 1.06
USP11P51784 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.7■■□□□ 1.06
USP11P51784 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.7■■□□□ 1.06
USP11P51784 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP11P51784 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.69■■□□□ 1.06
USP11P51784 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
USP11P51784 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.69■■□□□ 1.06
USP11P51784 AC116562.4-201ENST00000641316 2276 ntBASIC21.69■■□□□ 1.06
USP11P51784 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.69■■□□□ 1.06
USP11P51784 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.69■■□□□ 1.06
USP11P51784 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
USP11P51784 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.69■■□□□ 1.06
USP11P51784 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP11P51784 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.69■■□□□ 1.06
USP11P51784 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.69■■□□□ 1.06
USP11P51784 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.68■■□□□ 1.06
USP11P51784 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.68■■□□□ 1.06
USP11P51784 AC087499.1-201ENST00000418141 1075 ntBASIC21.68■■□□□ 1.06
USP11P51784 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.68■■□□□ 1.06
USP11P51784 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
USP11P51784 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
USP11P51784 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.68■■□□□ 1.06
USP11P51784 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 KRT8P9-201ENST00000558927 1449 ntBASIC21.68■■□□□ 1.06
USP11P51784 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
USP11P51784 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
USP11P51784 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
USP11P51784 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.68■■□□□ 1.06
USP11P51784 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP11P51784 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
USP11P51784 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.67■■□□□ 1.06
USP11P51784 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP11P51784 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
USP11P51784 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms