Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CENPAP49450 TSPY6P-201ENST00000448518 926 ntBASIC17.38■□□□□ 0.37
CENPAP49450 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CENPAP49450 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CENPAP49450 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.38■□□□□ 0.37
CENPAP49450 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CENPAP49450 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CENPAP49450 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 TFP1-202ENST00000475455 1573 ntBASIC17.37■□□□□ 0.37
CENPAP49450 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.37■□□□□ 0.37
CENPAP49450 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.37■□□□□ 0.37
CENPAP49450 NCF1B-203ENST00000435988 1254 ntBASIC17.37■□□□□ 0.37
CENPAP49450 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.37■□□□□ 0.37
CENPAP49450 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.37■□□□□ 0.37
CENPAP49450 RPS2P52-201ENST00000469610 820 ntBASIC17.37■□□□□ 0.37
CENPAP49450 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.37■□□□□ 0.37
CENPAP49450 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CENPAP49450 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CENPAP49450 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CENPAP49450 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CENPAP49450 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CENPAP49450 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.36■□□□□ 0.37
CENPAP49450 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.36■□□□□ 0.37
CENPAP49450 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CENPAP49450 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.36■□□□□ 0.37
CENPAP49450 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.36■□□□□ 0.37
CENPAP49450 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CENPAP49450 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 LINC01465-201ENST00000408887 1940 ntBASIC17.36■□□□□ 0.37
CENPAP49450 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CENPAP49450 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
CENPAP49450 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.36■□□□□ 0.37
CENPAP49450 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CENPAP49450 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.36■□□□□ 0.37
CENPAP49450 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.36■□□□□ 0.37
CENPAP49450 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.35■□□□□ 0.37
CENPAP49450 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CENPAP49450 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.35■□□□□ 0.37
CENPAP49450 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.35■□□□□ 0.37
CENPAP49450 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms