Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.15■□□□□ 0.5
CDKN2CP42773 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.15■□□□□ 0.5
CDKN2CP42773 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.15■□□□□ 0.5
CDKN2CP42773 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.15■□□□□ 0.5
CDKN2CP42773 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDKN2CP42773 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2CP42773 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDKN2CP42773 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKN2CP42773 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDKN2CP42773 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.14■□□□□ 0.5
CDKN2CP42773 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
CDKN2CP42773 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CDKN2CP42773 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CDKN2CP42773 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2CP42773 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDKN2CP42773 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKN2CP42773 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 TUBB8P6-201ENST00000436895 1288 ntBASIC18.14■□□□□ 0.49
CDKN2CP42773 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2CP42773 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2CP42773 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2CP42773 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CDKN2CP42773 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CDKN2CP42773 AC008687.6-201ENST00000596318 630 ntBASIC18.14■□□□□ 0.49
CDKN2CP42773 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKN2CP42773 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2CP42773 AL121829.2-201ENST00000620908 328 ntBASIC18.14■□□□□ 0.49
CDKN2CP42773 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.14■□□□□ 0.49
CDKN2CP42773 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2CP42773 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDKN2CP42773 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKN2CP42773 WIZP1-201ENST00000531444 2299 ntBASIC18.14■□□□□ 0.49
CDKN2CP42773 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2CP42773 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDKN2CP42773 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CDKN2CP42773 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2CP42773 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CDKN2CP42773 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2CP42773 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKN2CP42773 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CDKN2CP42773 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKN2CP42773 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2CP42773 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKN2CP42773 AL512353.2-201ENST00000448759 1962 ntBASIC18.13■□□□□ 0.49
CDKN2CP42773 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.13■□□□□ 0.49
CDKN2CP42773 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2CP42773 AC093525.10-201ENST00000625130 1569 ntBASIC18.13■□□□□ 0.49
CDKN2CP42773 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CDKN2CP42773 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDKN2CP42773 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDKN2CP42773 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKN2CP42773 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CDKN2CP42773 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDKN2CP42773 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDKN2CP42773 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2CP42773 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKN2CP42773 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDKN2CP42773 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKN2CP42773 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms