Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.8■□□□□ 0.92
TNFSF9P41273 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF9P41273 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF9P41273 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TNFSF9P41273 AL032819.2-201ENST00000624543 2162 ntBASIC20.79■□□□□ 0.92
TNFSF9P41273 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF9P41273 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF9P41273 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.79■□□□□ 0.92
TNFSF9P41273 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF9P41273 INGX-201ENST00000359239 846 ntBASIC20.79■□□□□ 0.92
TNFSF9P41273 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF9P41273 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
TNFSF9P41273 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF9P41273 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF9P41273 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF9P41273 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF9P41273 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF9P41273 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TNFSF9P41273 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF9P41273 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF9P41273 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF9P41273 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFSF9P41273 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFSF9P41273 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNFSF9P41273 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF9P41273 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFSF9P41273 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF9P41273 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF9P41273 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFSF9P41273 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFSF9P41273 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFSF9P41273 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNFSF9P41273 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.78■□□□□ 0.92
TNFSF9P41273 NAPSB-206ENST00000562112 1266 ntBASIC20.78■□□□□ 0.92
TNFSF9P41273 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.78■□□□□ 0.92
TNFSF9P41273 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TNFSF9P41273 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNFSF9P41273 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF9P41273 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFSF9P41273 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFSF9P41273 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFSF9P41273 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFSF9P41273 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFSF9P41273 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFSF9P41273 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFSF9P41273 AC097493.4-201ENST00000641197 219 ntBASIC20.77■□□□□ 0.92
TNFSF9P41273 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFSF9P41273 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFSF9P41273 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF9P41273 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNFSF9P41273 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TNFSF9P41273 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.77■□□□□ 0.91
TNFSF9P41273 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.77■□□□□ 0.91
TNFSF9P41273 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFSF9P41273 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 PRSS44-201ENST00000515154 1146 ntBASIC20.76■□□□□ 0.91
TNFSF9P41273 LINC01023-201ENST00000606054 436 ntBASIC20.76■□□□□ 0.91
TNFSF9P41273 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFSF9P41273 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF9P41273 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF9P41273 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF9P41273 LINC01568-207ENST00000641790 1380 ntBASIC20.75■□□□□ 0.91
TNFSF9P41273 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFSF9P41273 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms