Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
MDH1P40925 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MDH1P40925 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.29■□□□□ 0.68
MDH1P40925 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.29■□□□□ 0.68
MDH1P40925 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MDH1P40925 IRS3P-201ENST00000223076 1006 ntBASIC19.29■□□□□ 0.68
MDH1P40925 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MDH1P40925 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MDH1P40925 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.29■□□□□ 0.68
MDH1P40925 SLC7A5P1-201ENST00000568957 537 ntBASIC19.29■□□□□ 0.68
MDH1P40925 AL136162.1-201ENST00000607711 1078 ntBASIC19.29■□□□□ 0.68
MDH1P40925 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.29■□□□□ 0.68
MDH1P40925 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.29■□□□□ 0.68
MDH1P40925 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.29■□□□□ 0.68
MDH1P40925 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
MDH1P40925 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
MDH1P40925 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.29■□□□□ 0.68
MDH1P40925 SIRPAP1-201ENST00000448467 1770 ntBASIC19.29■□□□□ 0.68
MDH1P40925 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MDH1P40925 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.28■□□□□ 0.68
MDH1P40925 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.28■□□□□ 0.68
MDH1P40925 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.28■□□□□ 0.68
MDH1P40925 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.28■□□□□ 0.68
MDH1P40925 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.28■□□□□ 0.68
MDH1P40925 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.28■□□□□ 0.68
MDH1P40925 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MDH1P40925 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MDH1P40925 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MDH1P40925 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.27■□□□□ 0.68
MDH1P40925 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
MDH1P40925 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MDH1P40925 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 AL356441.2-201ENST00000443009 864 ntBASIC19.27■□□□□ 0.68
MDH1P40925 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.27■□□□□ 0.68
MDH1P40925 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.27■□□□□ 0.68
MDH1P40925 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.27■□□□□ 0.68
MDH1P40925 AL354811.1-201ENST00000610286 706 ntBASIC19.27■□□□□ 0.68
MDH1P40925 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
MDH1P40925 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MDH1P40925 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MDH1P40925 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.27■□□□□ 0.67
MDH1P40925 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MDH1P40925 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MDH1P40925 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.27■□□□□ 0.67
MDH1P40925 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MDH1P40925 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MDH1P40925 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MDH1P40925 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MDH1P40925 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.27■□□□□ 0.67
MDH1P40925 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MDH1P40925 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.27■□□□□ 0.67
MDH1P40925 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MDH1P40925 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.26■□□□□ 0.67
MDH1P40925 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.26■□□□□ 0.67
MDH1P40925 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.26■□□□□ 0.67
MDH1P40925 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MDH1P40925 AC134043.2-201ENST00000624206 2238 ntBASIC19.26■□□□□ 0.67
MDH1P40925 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
MDH1P40925 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MDH1P40925 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 AC135279.3-201ENST00000610945 1311 ntBASIC19.25■□□□□ 0.67
MDH1P40925 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MDH1P40925 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
MDH1P40925 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.25■□□□□ 0.67
MDH1P40925 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
MDH1P40925 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms