Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.67■■□□□ 1.38
PDE6BP35913 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.67■■□□□ 1.38
PDE6BP35913 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.67■■□□□ 1.38
PDE6BP35913 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PDE6BP35913 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PDE6BP35913 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDE6BP35913 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDE6BP35913 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDE6BP35913 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.67■■□□□ 1.38
PDE6BP35913 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.67■■□□□ 1.38
PDE6BP35913 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDE6BP35913 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDE6BP35913 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PDE6BP35913 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.66■■□□□ 1.38
PDE6BP35913 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
PDE6BP35913 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.66■■□□□ 1.38
PDE6BP35913 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PDE6BP35913 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
PDE6BP35913 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.66■■□□□ 1.38
PDE6BP35913 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDE6BP35913 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 AL162741.1-201ENST00000565563 1558 ntBASIC23.65■■□□□ 1.38
PDE6BP35913 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.65■■□□□ 1.38
PDE6BP35913 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 AC020907.5-201ENST00000624372 1936 ntBASIC23.65■■□□□ 1.38
PDE6BP35913 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PDE6BP35913 GPAT2P1-201ENST00000444924 1672 ntBASIC23.65■■□□□ 1.38
PDE6BP35913 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.65■■□□□ 1.38
PDE6BP35913 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.65■■□□□ 1.38
PDE6BP35913 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PDE6BP35913 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE6BP35913 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.64■■□□□ 1.38
PDE6BP35913 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.64■■□□□ 1.38
PDE6BP35913 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.64■■□□□ 1.38
PDE6BP35913 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PDE6BP35913 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PDE6BP35913 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 CHCHD2P8-201ENST00000429873 447 ntBASIC23.64■■□□□ 1.37
PDE6BP35913 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PDE6BP35913 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 IFNL4P1-201ENST00000607083 540 ntBASIC23.64■■□□□ 1.37
PDE6BP35913 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.64■■□□□ 1.37
PDE6BP35913 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PDE6BP35913 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 AC093525.10-201ENST00000625130 1569 ntBASIC23.64■■□□□ 1.37
PDE6BP35913 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PDE6BP35913 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
PDE6BP35913 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 AL691432.2-201ENST00000607222 2038 ntBASIC23.64■■□□□ 1.37
PDE6BP35913 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PDE6BP35913 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE6BP35913 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.64■■□□□ 1.37
PDE6BP35913 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
PDE6BP35913 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PDE6BP35913 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.63■■□□□ 1.37
PDE6BP35913 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.63■■□□□ 1.37
PDE6BP35913 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.63■■□□□ 1.37
PDE6BP35913 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.63■■□□□ 1.37
PDE6BP35913 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.63■■□□□ 1.37
PDE6BP35913 CLDN5-201ENST00000403084 2357 ntBASIC23.63■■□□□ 1.37
PDE6BP35913 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms