Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SOX6P35712 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 FP475955.4-201ENST00000623131 1990 ntBASIC17.19■□□□□ 0.34
SOX6P35712 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.19■□□□□ 0.34
SOX6P35712 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SOX6P35712 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX6P35712 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SOX6P35712 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX6P35712 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.19■□□□□ 0.34
SOX6P35712 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 KRT8P17-201ENST00000453110 1448 ntBASIC17.19■□□□□ 0.34
SOX6P35712 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 AC067852.2-201ENST00000590513 2313 ntBASIC17.19■□□□□ 0.34
SOX6P35712 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX6P35712 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SOX6P35712 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SOX6P35712 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX6P35712 TEX21P-204ENST00000641479 1693 ntBASIC17.18■□□□□ 0.34
SOX6P35712 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX6P35712 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX6P35712 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
SOX6P35712 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.18■□□□□ 0.34
SOX6P35712 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SOX6P35712 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.18■□□□□ 0.34
SOX6P35712 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX6P35712 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX6P35712 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.18■□□□□ 0.34
SOX6P35712 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
SOX6P35712 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SOX6P35712 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX6P35712 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SOX6P35712 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX6P35712 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SOX6P35712 CROCCP1-201ENST00000426910 5675 ntBASIC17.17■□□□□ 0.34
SOX6P35712 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.17■□□□□ 0.34
SOX6P35712 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SOX6P35712 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.17■□□□□ 0.34
SOX6P35712 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.17■□□□□ 0.34
SOX6P35712 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.17■□□□□ 0.34
SOX6P35712 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.17■□□□□ 0.34
SOX6P35712 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.17■□□□□ 0.34
SOX6P35712 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SOX6P35712 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SOX6P35712 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SOX6P35712 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX6P35712 AL512353.2-201ENST00000448759 1962 ntBASIC17.17■□□□□ 0.34
SOX6P35712 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.16■□□□□ 0.34
SOX6P35712 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX6P35712 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms