Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX1P22670 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX1P22670 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
RFX1P22670 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX1P22670 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX1P22670 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFX1P22670 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RFX1P22670 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
RFX1P22670 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFX1P22670 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX1P22670 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.88■□□□□ 0.93
RFX1P22670 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.88■□□□□ 0.93
RFX1P22670 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 AC005363.2-201ENST00000618631 242 ntBASIC20.88■□□□□ 0.93
RFX1P22670 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX1P22670 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFX1P22670 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFX1P22670 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RFX1P22670 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RFX1P22670 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.88■□□□□ 0.93
RFX1P22670 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX1P22670 AC104417.2-201ENST00000562989 1793 ntBASIC20.87■□□□□ 0.93
RFX1P22670 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 AP000974.1-201ENST00000623909 2387 ntBASIC20.87■□□□□ 0.93
RFX1P22670 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.87■□□□□ 0.93
RFX1P22670 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.87■□□□□ 0.93
RFX1P22670 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.87■□□□□ 0.93
RFX1P22670 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.87■□□□□ 0.93
RFX1P22670 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.87■□□□□ 0.93
RFX1P22670 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RFX1P22670 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RFX1P22670 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX1P22670 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.86■□□□□ 0.93
RFX1P22670 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX1P22670 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFX1P22670 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFX1P22670 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RFX1P22670 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX1P22670 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX1P22670 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.86■□□□□ 0.93
RFX1P22670 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.86■□□□□ 0.93
RFX1P22670 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX1P22670 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.86■□□□□ 0.93
RFX1P22670 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.85■□□□□ 0.93
RFX1P22670 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RFX1P22670 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFX1P22670 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFX1P22670 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RFX1P22670 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.85■□□□□ 0.93
RFX1P22670 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.85■□□□□ 0.93
RFX1P22670 AL353708.3-201ENST00000610272 989 ntBASIC20.85■□□□□ 0.93
RFX1P22670 AC092865.7-201ENST00000641832 219 ntBASIC20.85■□□□□ 0.93
RFX1P22670 AC098818.2-201ENST00000564925 2320 ntBASIC20.85■□□□□ 0.93
RFX1P22670 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 TEX21P-204ENST00000641479 1693 ntBASIC20.85■□□□□ 0.93
RFX1P22670 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX1P22670 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 TNXA-203ENST00000507684 2038 ntBASIC20.84■□□□□ 0.93
RFX1P22670 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFX1P22670 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.84■□□□□ 0.93
RFX1P22670 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms