Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC32.98■■■□□ 2.87
CFTRP13569 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
CFTRP13569 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC32.98■■■□□ 2.87
CFTRP13569 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CFTRP13569 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC32.97■■■□□ 2.87
CFTRP13569 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
CFTRP13569 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CFTRP13569 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC32.97■■■□□ 2.87
CFTRP13569 KRT16P4-201ENST00000453883 522 ntBASIC32.97■■■□□ 2.87
CFTRP13569 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC32.97■■■□□ 2.87
CFTRP13569 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC32.97■■■□□ 2.87
CFTRP13569 AL121912.1-201ENST00000603683 238 ntBASIC32.97■■■□□ 2.87
CFTRP13569 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CFTRP13569 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC32.97■■■□□ 2.87
CFTRP13569 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CFTRP13569 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC32.96■■■□□ 2.87
CFTRP13569 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
CFTRP13569 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC32.96■■■□□ 2.87
CFTRP13569 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
CFTRP13569 AP000867.3-201ENST00000524675 377 ntBASIC32.96■■■□□ 2.87
CFTRP13569 NAA38-203ENST00000575071 553 ntTSL 2 BASIC32.96■■■□□ 2.87
CFTRP13569 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
CFTRP13569 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CFTRP13569 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CFTRP13569 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC32.95■■■□□ 2.87
CFTRP13569 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.87
CFTRP13569 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC32.95■■■□□ 2.87
CFTRP13569 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CFTRP13569 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC32.95■■■□□ 2.87
CFTRP13569 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
CFTRP13569 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC32.95■■■□□ 2.87
CFTRP13569 RNA5SP419-201ENST00000515908 135 ntBASIC32.95■■■□□ 2.87
CFTRP13569 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC32.95■■■□□ 2.87
CFTRP13569 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC32.95■■■□□ 2.87
CFTRP13569 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC32.95■■■□□ 2.87
CFTRP13569 CALM3-211ENST00000598871 561 ntTSL 4 BASIC32.95■■■□□ 2.87
CFTRP13569 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CFTRP13569 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CFTRP13569 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
CFTRP13569 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.86
CFTRP13569 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC32.94■■■□□ 2.86
CFTRP13569 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC32.94■■■□□ 2.86
CFTRP13569 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC32.94■■■□□ 2.86
CFTRP13569 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC32.94■■■□□ 2.86
CFTRP13569 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFTRP13569 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC32.93■■■□□ 2.86
CFTRP13569 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC32.93■■■□□ 2.86
CFTRP13569 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC32.93■■■□□ 2.86
CFTRP13569 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
CFTRP13569 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CFTRP13569 BX640515.1-201ENST00000617215 977 ntBASIC32.93■■■□□ 2.86
CFTRP13569 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CFTRP13569 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
CFTRP13569 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
CFTRP13569 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CFTRP13569 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC32.92■■■□□ 2.86
CFTRP13569 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC32.92■■■□□ 2.86
CFTRP13569 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CFTRP13569 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CFTRP13569 TEX30-205ENST00000376029 959 ntTSL 2 BASIC32.92■■■□□ 2.86
CFTRP13569 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC32.92■■■□□ 2.86
CFTRP13569 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CFTRP13569 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC32.92■■■□□ 2.86
CFTRP13569 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
CFTRP13569 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
CFTRP13569 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
CFTRP13569 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CFTRP13569 BAALC-202ENST00000306391 243 ntTSL 5 BASIC32.91■■■□□ 2.86
CFTRP13569 BAALC-204ENST00000330955 222 ntTSL 5 BASIC32.91■■■□□ 2.86
CFTRP13569 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC32.91■■■□□ 2.86
CFTRP13569 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC32.91■■■□□ 2.86
CFTRP13569 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
CFTRP13569 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CFTRP13569 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CFTRP13569 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CFTRP13569 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
CFTRP13569 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
CFTRP13569 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC32.9■■■□□ 2.86
CFTRP13569 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC32.9■■■□□ 2.86
CFTRP13569 AC120114.3-201ENST00000611923 658 ntBASIC32.9■■■□□ 2.86
CFTRP13569 AP005212.1-201ENST00000581547 1997 ntBASIC32.9■■■□□ 2.86
CFTRP13569 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC32.9■■■□□ 2.86
CFTRP13569 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
CFTRP13569 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms