Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
FREM3P0C091 MMP23A-201ENST00000234610 1017 ntBASIC17.43■□□□□ 0.38
FREM3P0C091 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 AC004980.1-204ENST00000429707 299 ntBASIC17.43■□□□□ 0.38
FREM3P0C091 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.43■□□□□ 0.38
FREM3P0C091 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
FREM3P0C091 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.43■□□□□ 0.38
FREM3P0C091 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FREM3P0C091 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.43■□□□□ 0.38
FREM3P0C091 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FREM3P0C091 CRYGFP-201ENST00000418459 633 ntBASIC17.42■□□□□ 0.38
FREM3P0C091 KRT18P57-201ENST00000443599 1254 ntBASIC17.42■□□□□ 0.38
FREM3P0C091 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.42■□□□□ 0.38
FREM3P0C091 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM3P0C091 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.42■□□□□ 0.38
FREM3P0C091 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.42■□□□□ 0.38
FREM3P0C091 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM3P0C091 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.42■□□□□ 0.38
FREM3P0C091 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FREM3P0C091 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FREM3P0C091 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.42■□□□□ 0.38
FREM3P0C091 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM3P0C091 SLC25A3P1-201ENST00000443844 931 ntBASIC17.42■□□□□ 0.38
FREM3P0C091 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM3P0C091 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM3P0C091 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.42■□□□□ 0.38
FREM3P0C091 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FREM3P0C091 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 AC005332.7-201ENST00000614046 2005 ntBASIC17.42■□□□□ 0.38
FREM3P0C091 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FREM3P0C091 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.41■□□□□ 0.38
FREM3P0C091 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 KRT18P22-201ENST00000402024 1347 ntBASIC17.41■□□□□ 0.38
FREM3P0C091 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
FREM3P0C091 AC005521.1-201ENST00000393351 872 ntBASIC17.41■□□□□ 0.38
FREM3P0C091 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 AC011298.2-201ENST00000617989 482 ntBASIC17.41■□□□□ 0.38
FREM3P0C091 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.41■□□□□ 0.38
FREM3P0C091 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
FREM3P0C091 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FREM3P0C091 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
FREM3P0C091 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.41■□□□□ 0.38
FREM3P0C091 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
FREM3P0C091 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.41■□□□□ 0.38
FREM3P0C091 SLC25A1P4-201ENST00000567977 778 ntBASIC17.41■□□□□ 0.38
FREM3P0C091 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FREM3P0C091 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FREM3P0C091 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.41■□□□□ 0.38
FREM3P0C091 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FREM3P0C091 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM3P0C091 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM3P0C091 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.4■□□□□ 0.38
FREM3P0C091 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM3P0C091 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
FREM3P0C091 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
FREM3P0C091 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.4■□□□□ 0.38
FREM3P0C091 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM3P0C091 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.4■□□□□ 0.38
FREM3P0C091 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM3P0C091 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FREM3P0C091 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
FREM3P0C091 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.4■□□□□ 0.38
FREM3P0C091 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FREM3P0C091 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FREM3P0C091 MFAP1P1-201ENST00000442257 1255 ntBASIC17.4■□□□□ 0.38
FREM3P0C091 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.4■□□□□ 0.38
FREM3P0C091 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.4■□□□□ 0.38
FREM3P0C091 AC145285.6-201ENST00000604632 637 ntBASIC17.4■□□□□ 0.38
FREM3P0C091 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FREM3P0C091 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms