Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL5A2P05997 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.32■■□□□ 1.64
COL5A2P05997 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL5A2P05997 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL5A2P05997 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC25.32■■□□□ 1.64
COL5A2P05997 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
COL5A2P05997 SLC25A6P4-201ENST00000586535 553 ntBASIC25.32■■□□□ 1.64
COL5A2P05997 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL5A2P05997 AL157888.1-201ENST00000631930 593 ntBASIC25.32■■□□□ 1.64
COL5A2P05997 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COL5A2P05997 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COL5A2P05997 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL5A2P05997 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.32■■□□□ 1.64
COL5A2P05997 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC25.31■■□□□ 1.64
COL5A2P05997 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.31■■□□□ 1.64
COL5A2P05997 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC25.31■■□□□ 1.64
COL5A2P05997 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.31■■□□□ 1.64
COL5A2P05997 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 AL023284.2-201ENST00000405850 579 ntBASIC25.31■■□□□ 1.64
COL5A2P05997 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC25.31■■□□□ 1.64
COL5A2P05997 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.31■■□□□ 1.64
COL5A2P05997 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL5A2P05997 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
COL5A2P05997 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
COL5A2P05997 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
COL5A2P05997 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.3■■□□□ 1.64
COL5A2P05997 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
COL5A2P05997 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
COL5A2P05997 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
COL5A2P05997 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
COL5A2P05997 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC25.3■■□□□ 1.64
COL5A2P05997 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 AL136038.4-201ENST00000603606 1261 ntBASIC25.3■■□□□ 1.64
COL5A2P05997 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
COL5A2P05997 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL5A2P05997 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.29■■□□□ 1.64
COL5A2P05997 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.29■■□□□ 1.64
COL5A2P05997 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
COL5A2P05997 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC25.29■■□□□ 1.64
COL5A2P05997 AC106795.1-205ENST00000512851 1056 ntBASIC25.29■■□□□ 1.64
COL5A2P05997 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 MIR3180-5-201ENST00000583743 153 ntBASIC25.29■■□□□ 1.64
COL5A2P05997 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC25.29■■□□□ 1.64
COL5A2P05997 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
COL5A2P05997 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
COL5A2P05997 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.29■■□□□ 1.64
COL5A2P05997 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.29■■□□□ 1.64
COL5A2P05997 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.29■■□□□ 1.64
COL5A2P05997 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL5A2P05997 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL5A2P05997 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
COL5A2P05997 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL5A2P05997 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC25.28■■□□□ 1.64
COL5A2P05997 RNF126P1-202ENST00000569893 925 ntBASIC25.28■■□□□ 1.64
COL5A2P05997 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC25.28■■□□□ 1.64
COL5A2P05997 IL11-204ENST00000590625 1028 ntTSL 2 BASIC25.28■■□□□ 1.64
COL5A2P05997 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC25.28■■□□□ 1.64
COL5A2P05997 AC006538.3-201ENST00000612495 578 ntBASIC25.28■■□□□ 1.64
COL5A2P05997 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.28■■□□□ 1.64
COL5A2P05997 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL5A2P05997 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL5A2P05997 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL5A2P05997 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL5A2P05997 MIR662-201ENST00000384847 95 ntBASIC25.28■■□□□ 1.64
COL5A2P05997 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.28■■□□□ 1.64
COL5A2P05997 AL160237.2-201ENST00000556165 472 ntBASIC25.28■■□□□ 1.64
COL5A2P05997 AC012615.1-201ENST00000565797 1299 ntBASIC25.28■■□□□ 1.64
COL5A2P05997 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms