Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 TSPY23P-201ENST00000440136 739 ntBASIC19.48■□□□□ 0.71
HLA-DQB2P05538 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 AC026271.3-201ENST00000571884 352 ntBASIC19.48■□□□□ 0.71
HLA-DQB2P05538 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 AL049637.2-201ENST00000641778 930 ntBASIC19.48■□□□□ 0.71
HLA-DQB2P05538 AL031985.4-201ENST00000642138 673 ntBASIC19.48■□□□□ 0.71
HLA-DQB2P05538 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQB2P05538 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 AC087289.5-201ENST00000586076 3175 ntBASIC19.47■□□□□ 0.71
HLA-DQB2P05538 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DQB2P05538 AP000974.1-201ENST00000623909 2387 ntBASIC19.47■□□□□ 0.71
HLA-DQB2P05538 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.46■□□□□ 0.71
HLA-DQB2P05538 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 TSPY21P-201ENST00000433481 731 ntBASIC19.46■□□□□ 0.71
HLA-DQB2P05538 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 AC091390.4-202ENST00000476426 537 ntBASIC19.46■□□□□ 0.71
HLA-DQB2P05538 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DQB2P05538 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 AC018445.3-201ENST00000624177 1945 ntBASIC19.45■□□□□ 0.7
HLA-DQB2P05538 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 AC098818.2-201ENST00000564925 2320 ntBASIC19.45■□□□□ 0.7
HLA-DQB2P05538 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 AC008040.2-201ENST00000461049 708 ntBASIC19.45■□□□□ 0.7
HLA-DQB2P05538 AC011506.1-201ENST00000474329 610 ntBASIC19.45■□□□□ 0.7
HLA-DQB2P05538 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms