Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 HLA-L-209ENST00000420110 1011 ntBASIC17.25■□□□□ 0.35
HLA-DPB1P04440 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.25■□□□□ 0.35
HLA-DPB1P04440 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 AL138781.1-201ENST00000566567 1274 ntBASIC17.25■□□□□ 0.35
HLA-DPB1P04440 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 AC104771.1-201ENST00000603335 964 ntBASIC17.25■□□□□ 0.35
HLA-DPB1P04440 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPB1P04440 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 HLA-G-202ENST00000376815 851 ntBASIC17.23■□□□□ 0.35
HLA-DPB1P04440 HLA-G-203ENST00000376818 1127 ntBASIC17.23■□□□□ 0.35
HLA-DPB1P04440 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.23■□□□□ 0.35
HLA-DPB1P04440 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 AC018470.1-201ENST00000624790 3129 ntBASIC17.23■□□□□ 0.35
HLA-DPB1P04440 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 WIZP1-201ENST00000531444 2299 ntBASIC17.23■□□□□ 0.35
HLA-DPB1P04440 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPB1P04440 Z98044.1-201ENST00000632503 1764 ntBASIC17.23■□□□□ 0.35
HLA-DPB1P04440 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPB1P04440 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms