Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CNOT4O95628 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT4O95628 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.05■□□□□ 0.32
CNOT4O95628 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNOT4O95628 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT4O95628 TMPOP1-202ENST00000424642 1267 ntBASIC17.05■□□□□ 0.32
CNOT4O95628 B3GAT3P1-201ENST00000471720 806 ntBASIC17.05■□□□□ 0.32
CNOT4O95628 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.05■□□□□ 0.32
CNOT4O95628 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.05■□□□□ 0.32
CNOT4O95628 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT4O95628 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT4O95628 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CNOT4O95628 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CNOT4O95628 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT4O95628 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CNOT4O95628 AC004951.3-201ENST00000418645 1148 ntBASIC17.04■□□□□ 0.32
CNOT4O95628 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.04■□□□□ 0.32
CNOT4O95628 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.04■□□□□ 0.32
CNOT4O95628 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
CNOT4O95628 AL445228.2-201ENST00000605589 952 ntBASIC17.04■□□□□ 0.32
CNOT4O95628 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT4O95628 AC130371.2-201ENST00000619443 611 ntBASIC17.04■□□□□ 0.32
CNOT4O95628 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CNOT4O95628 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT4O95628 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT4O95628 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT4O95628 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT4O95628 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 RBM17P1-201ENST00000453646 1190 ntBASIC17.03■□□□□ 0.32
CNOT4O95628 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT4O95628 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT4O95628 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.03■□□□□ 0.32
CNOT4O95628 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CNOT4O95628 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CNOT4O95628 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT4O95628 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT4O95628 RCC2P6-201ENST00000526625 1557 ntBASIC17.02■□□□□ 0.32
CNOT4O95628 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT4O95628 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT4O95628 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT4O95628 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT4O95628 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.02■□□□□ 0.32
CNOT4O95628 MESTP1-201ENST00000404287 994 ntBASIC17.02■□□□□ 0.32
CNOT4O95628 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT4O95628 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.02■□□□□ 0.32
CNOT4O95628 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.02■□□□□ 0.32
CNOT4O95628 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.02■□□□□ 0.32
CNOT4O95628 Z85996.1-201ENST00000494644 937 ntBASIC17.02■□□□□ 0.32
CNOT4O95628 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.02■□□□□ 0.32
CNOT4O95628 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.02■□□□□ 0.32
CNOT4O95628 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CNOT4O95628 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CNOT4O95628 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.02■□□□□ 0.32
CNOT4O95628 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CNOT4O95628 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CNOT4O95628 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT4O95628 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT4O95628 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.02■□□□□ 0.31
CNOT4O95628 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNOT4O95628 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms