Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CSPG5O95196 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.59■□□□□ 0.89
CSPG5O95196 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.59■□□□□ 0.89
CSPG5O95196 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.59■□□□□ 0.89
CSPG5O95196 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.59■□□□□ 0.89
CSPG5O95196 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG5O95196 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.58■□□□□ 0.89
CSPG5O95196 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG5O95196 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.58■□□□□ 0.89
CSPG5O95196 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.58■□□□□ 0.89
CSPG5O95196 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG5O95196 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.58■□□□□ 0.89
CSPG5O95196 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.58■□□□□ 0.89
CSPG5O95196 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.58■□□□□ 0.89
CSPG5O95196 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.58■□□□□ 0.89
CSPG5O95196 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.58■□□□□ 0.89
CSPG5O95196 AL031432.5-201ENST00000641059 760 ntBASIC20.58■□□□□ 0.89
CSPG5O95196 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
CSPG5O95196 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.58■□□□□ 0.88
CSPG5O95196 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 AL391422.3-201ENST00000603791 2761 ntBASIC20.57■□□□□ 0.88
CSPG5O95196 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
CSPG5O95196 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CSPG5O95196 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CSPG5O95196 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CSPG5O95196 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CSPG5O95196 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CSPG5O95196 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.57■□□□□ 0.88
CSPG5O95196 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 PRSS44-201ENST00000515154 1146 ntBASIC20.57■□□□□ 0.88
CSPG5O95196 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.57■□□□□ 0.88
CSPG5O95196 AC116407.4-201ENST00000623319 1061 ntBASIC20.57■□□□□ 0.88
CSPG5O95196 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.57■□□□□ 0.88
CSPG5O95196 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG5O95196 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.57■□□□□ 0.88
CSPG5O95196 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG5O95196 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CSPG5O95196 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG5O95196 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.56■□□□□ 0.88
CSPG5O95196 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CSPG5O95196 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG5O95196 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.56■□□□□ 0.88
CSPG5O95196 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG5O95196 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.56■□□□□ 0.88
CSPG5O95196 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.56■□□□□ 0.88
CSPG5O95196 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.56■□□□□ 0.88
CSPG5O95196 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG5O95196 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG5O95196 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.56■□□□□ 0.88
CSPG5O95196 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.56■□□□□ 0.88
CSPG5O95196 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CSPG5O95196 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
CSPG5O95196 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.55■□□□□ 0.88
CSPG5O95196 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.55■□□□□ 0.88
CSPG5O95196 AL512604.3-201ENST00000569583 964 ntBASIC20.55■□□□□ 0.88
CSPG5O95196 AC083849.1-201ENST00000615227 514 ntBASIC20.55■□□□□ 0.88
CSPG5O95196 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.55■□□□□ 0.88
CSPG5O95196 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.55■□□□□ 0.88
CSPG5O95196 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.55■□□□□ 0.88
CSPG5O95196 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG5O95196 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms