Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
KLHL41O60662 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL41O60662 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL41O60662 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KLHL41O60662 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL41O60662 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL41O60662 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL41O60662 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
KLHL41O60662 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.02■□□□□ 0.64
KLHL41O60662 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
KLHL41O60662 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL41O60662 FAM197Y4-202ENST00000622692 608 ntBASIC19.02■□□□□ 0.64
KLHL41O60662 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL41O60662 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
KLHL41O60662 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.02■□□□□ 0.63
KLHL41O60662 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
KLHL41O60662 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
KLHL41O60662 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.01■□□□□ 0.63
KLHL41O60662 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.01■□□□□ 0.63
KLHL41O60662 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.01■□□□□ 0.63
KLHL41O60662 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.01■□□□□ 0.63
KLHL41O60662 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.01■□□□□ 0.63
KLHL41O60662 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.01■□□□□ 0.63
KLHL41O60662 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.01■□□□□ 0.63
KLHL41O60662 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.01■□□□□ 0.63
KLHL41O60662 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL41O60662 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KLHL41O60662 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19■□□□□ 0.63
KLHL41O60662 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KLHL41O60662 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19■□□□□ 0.63
KLHL41O60662 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19■□□□□ 0.63
KLHL41O60662 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KLHL41O60662 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19■□□□□ 0.63
KLHL41O60662 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19■□□□□ 0.63
KLHL41O60662 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 AC105020.6-201ENST00000621523 1217 ntBASIC19■□□□□ 0.63
KLHL41O60662 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19■□□□□ 0.63
KLHL41O60662 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KLHL41O60662 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KLHL41O60662 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KLHL41O60662 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KLHL41O60662 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KLHL41O60662 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19■□□□□ 0.63
KLHL41O60662 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KLHL41O60662 LETM1P2-201ENST00000597330 2178 ntBASIC18.99■□□□□ 0.63
KLHL41O60662 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.99■□□□□ 0.63
KLHL41O60662 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
KLHL41O60662 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
KLHL41O60662 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.99■□□□□ 0.63
KLHL41O60662 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
KLHL41O60662 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.99■□□□□ 0.63
KLHL41O60662 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KLHL41O60662 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KLHL41O60662 HLA-G-202ENST00000376815 851 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms