Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SNX3O60493 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SNX3O60493 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX3O60493 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.92■□□□□ 0.62
SNX3O60493 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNX3O60493 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.92■□□□□ 0.62
SNX3O60493 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX3O60493 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX3O60493 AC106820.2-201ENST00000563775 3264 ntBASIC18.91■□□□□ 0.62
SNX3O60493 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX3O60493 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SNX3O60493 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX3O60493 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SNX3O60493 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX3O60493 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX3O60493 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX3O60493 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SNX3O60493 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.9■□□□□ 0.62
SNX3O60493 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.9■□□□□ 0.62
SNX3O60493 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 AC083906.6-201ENST00000641366 219 ntBASIC18.9■□□□□ 0.62
SNX3O60493 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNX3O60493 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SNX3O60493 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX3O60493 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SNX3O60493 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
SNX3O60493 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX3O60493 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX3O60493 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNX3O60493 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.89■□□□□ 0.62
SNX3O60493 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SNX3O60493 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.89■□□□□ 0.62
SNX3O60493 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNX3O60493 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX3O60493 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX3O60493 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX3O60493 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX3O60493 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX3O60493 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SNX3O60493 MIR939-201ENST00000401314 82 ntBASIC18.89■□□□□ 0.61
SNX3O60493 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.89■□□□□ 0.61
SNX3O60493 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.89■□□□□ 0.61
SNX3O60493 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX3O60493 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX3O60493 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX3O60493 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX3O60493 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX3O60493 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX3O60493 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX3O60493 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SNX3O60493 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX3O60493 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX3O60493 AC104417.2-201ENST00000562989 1793 ntBASIC18.88■□□□□ 0.61
SNX3O60493 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX3O60493 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX3O60493 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX3O60493 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX3O60493 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX3O60493 AC134043.2-201ENST00000624206 2238 ntBASIC18.88■□□□□ 0.61
SNX3O60493 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX3O60493 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms