Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC116562.4-201ENST00000641316 2276 ntBASIC19.49■□□□□ 0.71
KDELR3O43731 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 AC141586.3-201ENST00000562166 1838 ntBASIC19.49■□□□□ 0.71
KDELR3O43731 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.49■□□□□ 0.71
KDELR3O43731 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
KDELR3O43731 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.49■□□□□ 0.71
KDELR3O43731 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.49■□□□□ 0.71
KDELR3O43731 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.49■□□□□ 0.71
KDELR3O43731 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.49■□□□□ 0.71
KDELR3O43731 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.49■□□□□ 0.71
KDELR3O43731 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.49■□□□□ 0.71
KDELR3O43731 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDELR3O43731 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KDELR3O43731 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.48■□□□□ 0.71
KDELR3O43731 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
KDELR3O43731 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.48■□□□□ 0.71
KDELR3O43731 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.48■□□□□ 0.71
KDELR3O43731 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.48■□□□□ 0.71
KDELR3O43731 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.48■□□□□ 0.71
KDELR3O43731 KRT8P9-201ENST00000558927 1449 ntBASIC19.48■□□□□ 0.71
KDELR3O43731 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KDELR3O43731 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.48■□□□□ 0.71
KDELR3O43731 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDELR3O43731 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.47■□□□□ 0.71
KDELR3O43731 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 AC087499.1-201ENST00000418141 1075 ntBASIC19.47■□□□□ 0.71
KDELR3O43731 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.47■□□□□ 0.71
KDELR3O43731 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.47■□□□□ 0.71
KDELR3O43731 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KDELR3O43731 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
KDELR3O43731 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.47■□□□□ 0.71
KDELR3O43731 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.47■□□□□ 0.71
KDELR3O43731 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.47■□□□□ 0.71
KDELR3O43731 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.47■□□□□ 0.71
KDELR3O43731 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDELR3O43731 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
KDELR3O43731 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KDELR3O43731 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
KDELR3O43731 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KDELR3O43731 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.46■□□□□ 0.71
KDELR3O43731 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.46■□□□□ 0.71
KDELR3O43731 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.46■□□□□ 0.71
KDELR3O43731 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.46■□□□□ 0.71
KDELR3O43731 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.46■□□□□ 0.71
KDELR3O43731 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KDELR3O43731 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KDELR3O43731 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.46■□□□□ 0.71
KDELR3O43731 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KDELR3O43731 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KDELR3O43731 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KDELR3O43731 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
KDELR3O43731 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KDELR3O43731 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
KDELR3O43731 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KDELR3O43731 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.45■□□□□ 0.7
KDELR3O43731 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KDELR3O43731 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms