Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.72□□□□□ -0.21
PAX4O43316 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.72□□□□□ -0.21
PAX4O43316 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.72□□□□□ -0.21
PAX4O43316 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 RN7SL471P-201ENST00000580476 299 ntBASIC13.72□□□□□ -0.21
PAX4O43316 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.72□□□□□ -0.21
PAX4O43316 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.72□□□□□ -0.21
PAX4O43316 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.71□□□□□ -0.21
PAX4O43316 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
PAX4O43316 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX4O43316 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
PAX4O43316 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX4O43316 C1QBPP2-201ENST00000528754 825 ntBASIC13.71□□□□□ -0.21
PAX4O43316 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PAX4O43316 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX4O43316 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX4O43316 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX4O43316 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX4O43316 ITM2C-210ENST00000620962 501 ntBASIC13.71□□□□□ -0.21
PAX4O43316 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PAX4O43316 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PAX4O43316 AC125437.2-201ENST00000625180 2167 ntBASIC13.71□□□□□ -0.22
PAX4O43316 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PAX4O43316 AL158211.5-201ENST00000623583 2518 ntBASIC13.7□□□□□ -0.22
PAX4O43316 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PAX4O43316 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PAX4O43316 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.7□□□□□ -0.22
PAX4O43316 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PAX4O43316 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.7□□□□□ -0.22
PAX4O43316 KRT18P16-201ENST00000510337 1294 ntBASIC13.7□□□□□ -0.22
PAX4O43316 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.7□□□□□ -0.22
PAX4O43316 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.7□□□□□ -0.22
PAX4O43316 FAM197Y4-202ENST00000622692 608 ntBASIC13.7□□□□□ -0.22
PAX4O43316 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 KRT8P8-201ENST00000434750 1448 ntBASIC13.7□□□□□ -0.22
PAX4O43316 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PAX4O43316 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX4O43316 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
PAX4O43316 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms