Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SRGAP3O43295 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SRGAP3O43295 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SRGAP3O43295 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
SRGAP3O43295 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SRGAP3O43295 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.85■■□□□ 1.41
SRGAP3O43295 CRYGFP-201ENST00000418459 633 ntBASIC23.85■■□□□ 1.41
SRGAP3O43295 TSPY23P-201ENST00000440136 739 ntBASIC23.85■■□□□ 1.41
SRGAP3O43295 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SRGAP3O43295 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.85■■□□□ 1.41
SRGAP3O43295 AC096733.2-201ENST00000609937 1394 ntBASIC23.85■■□□□ 1.41
SRGAP3O43295 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.85■■□□□ 1.41
SRGAP3O43295 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.85■■□□□ 1.41
SRGAP3O43295 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SRGAP3O43295 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.85■■□□□ 1.41
SRGAP3O43295 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
SRGAP3O43295 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.84■■□□□ 1.41
SRGAP3O43295 AC005332.7-201ENST00000614046 2005 ntBASIC23.84■■□□□ 1.41
SRGAP3O43295 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.84■■□□□ 1.41
SRGAP3O43295 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.84■■□□□ 1.41
SRGAP3O43295 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
SRGAP3O43295 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.84■■□□□ 1.41
SRGAP3O43295 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.84■■□□□ 1.41
SRGAP3O43295 AC073912.3-201ENST00000624414 853 ntBASIC23.84■■□□□ 1.41
SRGAP3O43295 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP3O43295 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SRGAP3O43295 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.83■■□□□ 1.41
SRGAP3O43295 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.83■■□□□ 1.41
SRGAP3O43295 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 MMP23A-201ENST00000234610 1017 ntBASIC23.83■■□□□ 1.41
SRGAP3O43295 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 MFAP1P1-201ENST00000442257 1255 ntBASIC23.83■■□□□ 1.41
SRGAP3O43295 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.83■■□□□ 1.41
SRGAP3O43295 AP005242.2-201ENST00000580065 1175 ntBASIC23.83■■□□□ 1.41
SRGAP3O43295 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.83■■□□□ 1.41
SRGAP3O43295 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.83■■□□□ 1.41
SRGAP3O43295 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.83■■□□□ 1.41
SRGAP3O43295 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP3O43295 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SRGAP3O43295 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SRGAP3O43295 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SRGAP3O43295 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.83■■□□□ 1.4
SRGAP3O43295 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SRGAP3O43295 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.82■■□□□ 1.4
SRGAP3O43295 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SRGAP3O43295 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SRGAP3O43295 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 TSPY21P-201ENST00000433481 731 ntBASIC23.82■■□□□ 1.4
SRGAP3O43295 CKBP1-201ENST00000565489 1086 ntBASIC23.82■■□□□ 1.4
SRGAP3O43295 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.82■■□□□ 1.4
SRGAP3O43295 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.82■■□□□ 1.4
SRGAP3O43295 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.82■■□□□ 1.4
SRGAP3O43295 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP3O43295 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.82■■□□□ 1.4
SRGAP3O43295 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP3O43295 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP3O43295 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP3O43295 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP3O43295 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
SRGAP3O43295 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.81■■□□□ 1.4
SRGAP3O43295 AC087499.1-201ENST00000418141 1075 ntBASIC23.81■■□□□ 1.4
SRGAP3O43295 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.81■■□□□ 1.4
SRGAP3O43295 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP3O43295 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.81■■□□□ 1.4
SRGAP3O43295 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP3O43295 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.81■■□□□ 1.4
SRGAP3O43295 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP3O43295 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.81■■□□□ 1.4
SRGAP3O43295 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.81■■□□□ 1.4
SRGAP3O43295 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.8■■□□□ 1.4
SRGAP3O43295 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.8■■□□□ 1.4
SRGAP3O43295 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms