Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 IFNL4P1-201ENST00000607083 540 ntBASIC18.03■□□□□ 0.48
RRP8O43159 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 AL049796.1-201ENST00000565336 1766 ntBASIC18.03■□□□□ 0.48
RRP8O43159 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 AC073130.3-201ENST00000624389 2278 ntBASIC18.02■□□□□ 0.48
RRP8O43159 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RRP8O43159 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RRP8O43159 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.02■□□□□ 0.48
RRP8O43159 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RRP8O43159 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
RRP8O43159 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.02■□□□□ 0.48
RRP8O43159 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
RRP8O43159 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.02■□□□□ 0.48
RRP8O43159 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.02■□□□□ 0.48
RRP8O43159 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.02■□□□□ 0.48
RRP8O43159 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RRP8O43159 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RRP8O43159 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.02■□□□□ 0.48
RRP8O43159 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RRP8O43159 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RRP8O43159 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RRP8O43159 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.02■□□□□ 0.47
RRP8O43159 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RRP8O43159 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RRP8O43159 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RRP8O43159 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 AC009078.2-202ENST00000463353 338 ntBASIC18.01■□□□□ 0.47
RRP8O43159 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 AL121772.3-201ENST00000610840 674 ntBASIC18.01■□□□□ 0.47
RRP8O43159 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RRP8O43159 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.01■□□□□ 0.47
RRP8O43159 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RRP8O43159 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18■□□□□ 0.47
RRP8O43159 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18■□□□□ 0.47
RRP8O43159 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18■□□□□ 0.47
RRP8O43159 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RRP8O43159 SPDYE13P-201ENST00000445314 798 ntBASIC18■□□□□ 0.47
RRP8O43159 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18■□□□□ 0.47
RRP8O43159 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 AL160237.2-201ENST00000556165 472 ntBASIC18■□□□□ 0.47
RRP8O43159 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18■□□□□ 0.47
RRP8O43159 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18■□□□□ 0.47
RRP8O43159 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RRP8O43159 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18■□□□□ 0.47
RRP8O43159 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RRP8O43159 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms