Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.16■■□□□ 1.46
NPHP1O15259 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.16■■□□□ 1.46
NPHP1O15259 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.16■■□□□ 1.46
NPHP1O15259 NDUFV2-AS1-203ENST00000608008 779 ntBASIC24.16■■□□□ 1.46
NPHP1O15259 AC116407.4-201ENST00000623319 1061 ntBASIC24.16■■□□□ 1.46
NPHP1O15259 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.16■■□□□ 1.46
NPHP1O15259 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
NPHP1O15259 FEM1AP1-201ENST00000431297 1995 ntBASIC24.16■■□□□ 1.46
NPHP1O15259 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
NPHP1O15259 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.15■■□□□ 1.46
NPHP1O15259 KRT8P41-201ENST00000533985 1514 ntBASIC24.15■■□□□ 1.46
NPHP1O15259 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
NPHP1O15259 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC24.15■■□□□ 1.46
NPHP1O15259 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.15■■□□□ 1.46
NPHP1O15259 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC24.15■■□□□ 1.46
NPHP1O15259 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.15■■□□□ 1.46
NPHP1O15259 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
NPHP1O15259 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC24.15■■□□□ 1.46
NPHP1O15259 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.15■■□□□ 1.46
NPHP1O15259 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
NPHP1O15259 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
NPHP1O15259 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
NPHP1O15259 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.15■■□□□ 1.46
NPHP1O15259 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPHP1O15259 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPHP1O15259 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPHP1O15259 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
NPHP1O15259 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.14■■□□□ 1.46
NPHP1O15259 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPHP1O15259 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPHP1O15259 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
NPHP1O15259 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.14■■□□□ 1.46
NPHP1O15259 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NPHP1O15259 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHP1O15259 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHP1O15259 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.14■■□□□ 1.45
NPHP1O15259 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.14■■□□□ 1.45
NPHP1O15259 CLEC4GP1-201ENST00000596555 870 ntBASIC24.14■■□□□ 1.45
NPHP1O15259 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
NPHP1O15259 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHP1O15259 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPHP1O15259 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
NPHP1O15259 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
NPHP1O15259 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.13■■□□□ 1.45
NPHP1O15259 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.13■■□□□ 1.45
NPHP1O15259 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.13■■□□□ 1.45
NPHP1O15259 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.13■■□□□ 1.45
NPHP1O15259 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
NPHP1O15259 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPHP1O15259 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
NPHP1O15259 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
NPHP1O15259 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
NPHP1O15259 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 AC026396.1-201ENST00000419388 421 ntBASIC24.12■■□□□ 1.45
NPHP1O15259 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 ZNF444P1-201ENST00000559497 298 ntBASIC24.12■■□□□ 1.45
NPHP1O15259 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.12■■□□□ 1.45
NPHP1O15259 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHP1O15259 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC24.12■■□□□ 1.45
NPHP1O15259 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.12■■□□□ 1.45
NPHP1O15259 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPHP1O15259 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
NPHP1O15259 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
NPHP1O15259 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
NPHP1O15259 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPHP1O15259 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms