Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 HLA-G-202ENST00000376815 851 ntBASIC13.14□□□□□ -0.31
NDUFA1O15239 HLA-G-203ENST00000376818 1127 ntBASIC13.14□□□□□ -0.31
NDUFA1O15239 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.14□□□□□ -0.31
NDUFA1O15239 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
NDUFA1O15239 MFSD11-216ENST00000590393 1141 ntBASIC13.14□□□□□ -0.31
NDUFA1O15239 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 AL031963.3-201ENST00000606441 850 ntBASIC13.14□□□□□ -0.31
NDUFA1O15239 AC016405.3-201ENST00000607710 860 ntBASIC13.14□□□□□ -0.31
NDUFA1O15239 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NDUFA1O15239 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA1O15239 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA1O15239 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NDUFA1O15239 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA1O15239 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NDUFA1O15239 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA1O15239 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.13□□□□□ -0.31
NDUFA1O15239 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 MIR6821-201ENST00000617625 74 ntBASIC13.13□□□□□ -0.31
NDUFA1O15239 AC105020.6-201ENST00000621523 1217 ntBASIC13.13□□□□□ -0.31
NDUFA1O15239 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.13□□□□□ -0.31
NDUFA1O15239 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA1O15239 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NDUFA1O15239 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA1O15239 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.12□□□□□ -0.31
NDUFA1O15239 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.12□□□□□ -0.31
NDUFA1O15239 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NDUFA1O15239 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.12□□□□□ -0.31
NDUFA1O15239 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NDUFA1O15239 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms