Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.23■□□□□ 0.83
TRANK1O15050 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.22■□□□□ 0.83
TRANK1O15050 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.22■□□□□ 0.83
TRANK1O15050 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.22■□□□□ 0.83
TRANK1O15050 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 MIR662-201ENST00000384847 95 ntBASIC20.22■□□□□ 0.83
TRANK1O15050 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.22■□□□□ 0.83
TRANK1O15050 AP000867.3-201ENST00000524675 377 ntBASIC20.22■□□□□ 0.83
TRANK1O15050 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.22■□□□□ 0.83
TRANK1O15050 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.22■□□□□ 0.83
TRANK1O15050 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRANK1O15050 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TRANK1O15050 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
TRANK1O15050 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRANK1O15050 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 AF228730.7-201ENST00000641842 219 ntBASIC20.21■□□□□ 0.83
TRANK1O15050 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.21■□□□□ 0.83
TRANK1O15050 AL391422.3-201ENST00000603791 2761 ntBASIC20.21■□□□□ 0.83
TRANK1O15050 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRANK1O15050 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.21■□□□□ 0.83
TRANK1O15050 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.2■□□□□ 0.82
TRANK1O15050 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TRANK1O15050 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.2■□□□□ 0.82
TRANK1O15050 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRANK1O15050 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.2■□□□□ 0.82
TRANK1O15050 AC079776.4-201ENST00000511039 504 ntBASIC20.2■□□□□ 0.82
TRANK1O15050 AC024243.1-201ENST00000609234 778 ntBASIC20.2■□□□□ 0.82
TRANK1O15050 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRANK1O15050 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TRANK1O15050 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.2■□□□□ 0.82
TRANK1O15050 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRANK1O15050 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRANK1O15050 AC138894.3-201ENST00000603787 634 ntBASIC20.2■□□□□ 0.82
TRANK1O15050 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRANK1O15050 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRANK1O15050 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRANK1O15050 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRANK1O15050 TOB2P1-201ENST00000469761 992 ntBASIC20.19■□□□□ 0.82
TRANK1O15050 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.19■□□□□ 0.82
TRANK1O15050 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.19■□□□□ 0.82
TRANK1O15050 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRANK1O15050 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.19■□□□□ 0.82
TRANK1O15050 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRANK1O15050 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.19■□□□□ 0.82
TRANK1O15050 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRANK1O15050 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRANK1O15050 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRANK1O15050 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.18■□□□□ 0.82
TRANK1O15050 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.18■□□□□ 0.82
TRANK1O15050 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRANK1O15050 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRANK1O15050 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRANK1O15050 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRANK1O15050 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.18■□□□□ 0.82
TRANK1O15050 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRANK1O15050 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.18■□□□□ 0.82
TRANK1O15050 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.18■□□□□ 0.82
TRANK1O15050 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.18■□□□□ 0.82
TRANK1O15050 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.18■□□□□ 0.82
TRANK1O15050 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.18■□□□□ 0.82
TRANK1O15050 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRANK1O15050 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRANK1O15050 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.17■□□□□ 0.82
TRANK1O15050 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.17■□□□□ 0.82
TRANK1O15050 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.17■□□□□ 0.82
TRANK1O15050 AL773604.1-201ENST00000617417 272 ntBASIC20.17■□□□□ 0.82
TRANK1O15050 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRANK1O15050 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.17■□□□□ 0.82
TRANK1O15050 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRANK1O15050 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRANK1O15050 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms