Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COPEO14579 AL390719.1-204ENST00000412397 1219 ntBASIC19.2■□□□□ 0.66
COPEO14579 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.2■□□□□ 0.66
COPEO14579 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 AL512353.2-201ENST00000448759 1962 ntBASIC19.2■□□□□ 0.66
COPEO14579 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.2■□□□□ 0.66
COPEO14579 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COPEO14579 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
COPEO14579 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.19■□□□□ 0.66
COPEO14579 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
COPEO14579 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.19■□□□□ 0.66
COPEO14579 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COPEO14579 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.19■□□□□ 0.66
COPEO14579 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.19■□□□□ 0.66
COPEO14579 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COPEO14579 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COPEO14579 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 AC018470.1-201ENST00000624790 3129 ntBASIC19.19■□□□□ 0.66
COPEO14579 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COPEO14579 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPEO14579 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.18■□□□□ 0.66
COPEO14579 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
COPEO14579 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.18■□□□□ 0.66
COPEO14579 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COPEO14579 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.18■□□□□ 0.66
COPEO14579 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COPEO14579 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.18■□□□□ 0.66
COPEO14579 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.18■□□□□ 0.66
COPEO14579 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.18■□□□□ 0.66
COPEO14579 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPEO14579 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.17■□□□□ 0.66
COPEO14579 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COPEO14579 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.17■□□□□ 0.66
COPEO14579 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.17■□□□□ 0.66
COPEO14579 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.17■□□□□ 0.66
COPEO14579 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.17■□□□□ 0.66
COPEO14579 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPEO14579 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.17■□□□□ 0.66
COPEO14579 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.17■□□□□ 0.66
COPEO14579 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COPEO14579 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COPEO14579 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.17■□□□□ 0.66
COPEO14579 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPEO14579 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.17■□□□□ 0.66
COPEO14579 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPEO14579 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPEO14579 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.16■□□□□ 0.66
COPEO14579 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPEO14579 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPEO14579 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPEO14579 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPEO14579 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms