Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CACNB4O00305 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNB4O00305 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNB4O00305 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CACNB4O00305 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNB4O00305 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNB4O00305 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNB4O00305 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNB4O00305 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNB4O00305 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNB4O00305 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNB4O00305 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNB4O00305 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CACNB4O00305 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNB4O00305 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CACNB4O00305 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNB4O00305 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CACNB4O00305 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNB4O00305 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.96■□□□□ 0.63
CACNB4O00305 ATP5G1P1-201ENST00000448724 379 ntBASIC18.96■□□□□ 0.63
CACNB4O00305 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CACNB4O00305 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNB4O00305 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNB4O00305 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNB4O00305 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNB4O00305 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNB4O00305 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CACNB4O00305 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CACNB4O00305 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 TERF1P1-201ENST00000311003 1181 ntBASIC18.95■□□□□ 0.62
CACNB4O00305 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CACNB4O00305 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNB4O00305 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CACNB4O00305 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNB4O00305 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNB4O00305 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.95■□□□□ 0.62
CACNB4O00305 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNB4O00305 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNB4O00305 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.94■□□□□ 0.62
CACNB4O00305 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CACNB4O00305 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CACNB4O00305 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CACNB4O00305 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CACNB4O00305 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.94■□□□□ 0.62
CACNB4O00305 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CACNB4O00305 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CACNB4O00305 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNB4O00305 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 KRT18P57-201ENST00000443599 1254 ntBASIC18.94■□□□□ 0.62
CACNB4O00305 TSPY17P-201ENST00000450329 467 ntBASIC18.94■□□□□ 0.62
CACNB4O00305 CA15P1-201ENST00000481698 905 ntBASIC18.94■□□□□ 0.62
CACNB4O00305 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CACNB4O00305 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.94■□□□□ 0.62
CACNB4O00305 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNB4O00305 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNB4O00305 KRT8P11-201ENST00000409686 1436 ntBASIC18.93■□□□□ 0.62
CACNB4O00305 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNB4O00305 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNB4O00305 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNB4O00305 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNB4O00305 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CACNB4O00305 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNB4O00305 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNB4O00305 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNB4O00305 HMGA1P5-201ENST00000412453 271 ntBASIC18.93■□□□□ 0.62
CACNB4O00305 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms