Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.77■□□□□ 0.6
TAF4O00268 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TAF4O00268 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.77■□□□□ 0.6
TAF4O00268 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.77■□□□□ 0.6
TAF4O00268 AC011506.1-201ENST00000474329 610 ntBASIC18.77■□□□□ 0.6
TAF4O00268 COX11P1-201ENST00000489116 835 ntBASIC18.77■□□□□ 0.6
TAF4O00268 AC097488.1-201ENST00000507834 756 ntBASIC18.77■□□□□ 0.6
TAF4O00268 AC023632.3-201ENST00000521633 145 ntBASIC18.77■□□□□ 0.6
TAF4O00268 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.77■□□□□ 0.6
TAF4O00268 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TAF4O00268 SLC25A1P4-201ENST00000567977 778 ntBASIC18.77■□□□□ 0.6
TAF4O00268 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TAF4O00268 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.77■□□□□ 0.6
TAF4O00268 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.77■□□□□ 0.6
TAF4O00268 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.77■□□□□ 0.6
TAF4O00268 AC011558.1-201ENST00000623459 338 ntBASIC18.77■□□□□ 0.6
TAF4O00268 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.77■□□□□ 0.6
TAF4O00268 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.77■□□□□ 0.6
TAF4O00268 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.77■□□□□ 0.6
TAF4O00268 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 AC026471.1-201ENST00000564629 3026 ntBASIC18.77■□□□□ 0.6
TAF4O00268 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TAF4O00268 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TAF4O00268 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TAF4O00268 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
TAF4O00268 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TAF4O00268 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 AC005332.1-201ENST00000577698 1310 ntBASIC18.76■□□□□ 0.59
TAF4O00268 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TAF4O00268 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 AC073314.1-201ENST00000568729 2216 ntBASIC18.76■□□□□ 0.59
TAF4O00268 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 B3GAT3P1-201ENST00000471720 806 ntBASIC18.76■□□□□ 0.59
TAF4O00268 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.76■□□□□ 0.59
TAF4O00268 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.76■□□□□ 0.59
TAF4O00268 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.76■□□□□ 0.59
TAF4O00268 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.76■□□□□ 0.59
TAF4O00268 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TAF4O00268 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TAF4O00268 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TAF4O00268 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.75■□□□□ 0.59
TAF4O00268 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TAF4O00268 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.75■□□□□ 0.59
TAF4O00268 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TAF4O00268 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.75■□□□□ 0.59
TAF4O00268 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.75■□□□□ 0.59
TAF4O00268 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TAF4O00268 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TAF4O00268 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.75■□□□□ 0.59
TAF4O00268 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.75■□□□□ 0.59
TAF4O00268 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.75■□□□□ 0.59
TAF4O00268 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.75■□□□□ 0.59
TAF4O00268 DGCR10-201ENST00000609839 495 ntBASIC18.75■□□□□ 0.59
TAF4O00268 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TAF4O00268 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TAF4O00268 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TAF4O00268 AL049796.1-201ENST00000565336 1766 ntBASIC18.75■□□□□ 0.59
TAF4O00268 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.74■□□□□ 0.59
TAF4O00268 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.74■□□□□ 0.59
TAF4O00268 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TAF4O00268 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.74■□□□□ 0.59
TAF4O00268 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.74■□□□□ 0.59
TAF4O00268 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms