Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC53A6NM62 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LRRC53A6NM62 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC53A6NM62 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC53A6NM62 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC53A6NM62 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LRRC53A6NM62 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC53A6NM62 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC53A6NM62 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 AC093525.10-201ENST00000625130 1569 ntBASIC20.69■□□□□ 0.9
LRRC53A6NM62 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC53A6NM62 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC53A6NM62 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 FEM1AP3-201ENST00000403722 1741 ntBASIC20.68■□□□□ 0.9
LRRC53A6NM62 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 AC104771.1-201ENST00000603335 964 ntBASIC20.68■□□□□ 0.9
LRRC53A6NM62 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 AL512353.2-201ENST00000448759 1962 ntBASIC20.68■□□□□ 0.9
LRRC53A6NM62 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LRRC53A6NM62 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC53A6NM62 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 WIZP1-201ENST00000531444 2299 ntBASIC20.67■□□□□ 0.9
LRRC53A6NM62 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 UNC93B4-201ENST00000505679 747 ntBASIC20.67■□□□□ 0.9
LRRC53A6NM62 AC142086.2-201ENST00000569753 217 ntBASIC20.67■□□□□ 0.9
LRRC53A6NM62 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 Z98044.1-201ENST00000632503 1764 ntBASIC20.67■□□□□ 0.9
LRRC53A6NM62 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC53A6NM62 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC53A6NM62 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC53A6NM62 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRC53A6NM62 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms