Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 AP003071.4-201ENST00000562276 1284 ntBASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 HCG11-201ENST00000411553 5696 ntBASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SMIM9A6NGZ8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 UNC93B2-201ENST00000285383 730 ntBASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 TSPY21P-201ENST00000433481 731 ntBASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 AC130371.2-201ENST00000619443 611 ntBASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 RCC2P6-201ENST00000526625 1557 ntBASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM9A6NGZ8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMIM9A6NGZ8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.19
SMIM9A6NGZ8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 TSPY7P-201ENST00000431358 1114 ntBASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 B3GAT3P1-201ENST00000471720 806 ntBASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 Z85996.1-201ENST00000494644 937 ntBASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 AC011298.2-201ENST00000617989 482 ntBASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM9A6NGZ8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM9A6NGZ8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms