Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 HTR7P1-201ENST00000538670 1336 ntBASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC162PA2VCL2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 AL049812.1-201ENST00000432563 2267 ntBASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC162PA2VCL2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 FAM197Y4-202ENST00000622692 608 ntBASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC162PA2VCL2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 NIFKP9-201ENST00000419265 221 ntBASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 AC098590.1-201ENST00000468126 897 ntBASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms