Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 AC005082.1-201ENST00000413042 2259 ntBASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV9S1A1TA0A576 AC135050.7-201ENST00000624508 2218 ntBASIC19.33■□□□□ 0.69
TCRBV9S1A1TA0A576 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV9S1A1TA0A576 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.33■□□□□ 0.69
TCRBV9S1A1TA0A576 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV9S1A1TA0A576 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.33■□□□□ 0.69
TCRBV9S1A1TA0A576 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
TCRBV9S1A1TA0A576 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 TSPY6P-201ENST00000448518 926 ntBASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 PNMA6B-201ENST00000538162 1200 ntBASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TCRBV9S1A1TA0A576 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 SLC29A4P1-201ENST00000398760 971 ntBASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV9S1A1TA0A576 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 TUBB8P6-201ENST00000436895 1288 ntBASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 AC097658.1-201ENST00000475555 843 ntBASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 MIR4758-201ENST00000577688 71 ntBASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 AC060766.5-201ENST00000590539 871 ntBASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 AC120498.8-201ENST00000614275 531 ntBASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TCRBV9S1A1TA0A576 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms